Job Description P36929 Confidence 69.29% Date Thu Jan 5 11:53:58 GMT 2012 Rank 379 Aligned Residues 85 % Identity 16% Template c2hwkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Resolution 2.45 Å

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		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	S	Q	W	C	G	E	Q	Q	F	D	R	I	L	L	D	A	P	C	S	A	T	G	V	I	R	R	H	P	D	I	K	W	L	R	R	D	R	D	I	P	E	L	A	Q	L	Q	S	E	I	L	D	A	I	W	P	H	L	K	T	G	G	T	L	V	Y	A	T	C	S	V	L	P	E	E	N	S	L	Q
Query Conservation
Alig confidence																					.	.	.	.	.					.	.	.	.	.	.
Template Conservation																					.	.	.	.	.					.	.	.	.	.	.
Template Sequence		D	L	G	I	P	G	D	V	P	K	Y	D	I	I	F	V	N	V	R	.	.	.	.	.	T	P	Y	K	.	.	.	.	.	.	Y	H	H	Y	Q	Q	C	E	D	H	A	I	K	L	S	M	L	T	K	K	A	C	L	H	L	N	P	G	G	T	C	V	S	I	G	Y	G	Y	A	D	R	A	S	E	S	I
Template Known Secondary structure		G	G		S		T	T	S												.	.	.	.	.					.	.	.	.	.	.	S																T					G	G	G																S
Template Predicted Secondary structure																					.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.						.	.	.	.							.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	A	F	L	Q	R	T	A	D	A	E	L	C	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	A	I	A	R	Q	F	K	F	S	R	V	C	K	P
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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