Job Description P25748 Confidence 100.00% Date Thu Jan 5 11:42:36 GMT 2012 Rank 13 Aligned Residues 273 % Identity 24% Template c3mizB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator protein, laci PDBTitle: crystal structure of a putative transcriptional regulator2 protein, lacl family from rhizobium etli Resolution 1.91 Å

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		59	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		S	D	T	I	G	V	V	V	M	D	.	V	S	D	A	F	F	G	A	L	V	K	A	V	D	L	V	A	Q	Q	H	Q	K	Y	V	L	I	G	N	S	Y	H	E	A	E	K	E	R	H	A	I	E	V	L	I	R	Q	R	C	N	A	L	I	V	H	S	K	A	L	S	D	D	E	L	A	Q	F	M	D	N
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		S	N	T	F	G	I	I	T	D	Y	V	S	T	T	P	Y	S	V	D	I	V	R	G	I	Q	D	W	A	N	A	N	G	K	T	I	L	I	A	N	T	G	G	S	S	E	R	E	V	E	I	W	K	X	F	Q	S	H	R	I	D	G	V	L	Y	V	T	X	Y	R	R	I	V	D	P	E	S	G	D	V	S
Template Known Secondary structure												S	S	S		S	S	S														T	T									T	T															T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	M	V	L	I	N	R	V	V	P	G	Y	A	H	R	C	V	C	L	D	N	L	S	G	A	R	M	A	T	R	M	L	L	N	N	G	H	Q	R	I	G	Y	L	S	S	S	H	G	I	E	D	D	A	M	R	K	A	G	W	M	S	A	L	K	E	Q	D	I	I	P	P	E	S	W	I	G	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	T	V	X	I	N	C	R	P	Q	T	R	E	L	L	P	S	I	E	P	D	D	Y	Q	G	A	R	D	L	T	R	Y	L	L	E	R	G	H	R	R	I	G	Y	I	R	L	N	P	I	L	L	G	A	E	L	R	L	D	A	F	R	R	T	T	S	E	F	G	L	T	E	N	D	L	S	I	S	L	G
Template Known Secondary structure												S	S	T	T	S	S																					T	T			S								T	T																		T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
							218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure		.	.	.	.	.																																																												.
Query SS confidence		.	.	.	.	.																																																												.
Query Sequence		.	.	.	.	.	T	P	D	M	P	G	G	E	A	A	M	V	E	L	L	G	R	N	L	Q	L	T	A	V	F	A	Y	N	D	N	M	A	A	G	A	L	T	A	L	K	D	N	G	I	A	I	P	L	H	L	S	I	I	G	F	D	D	I	P	.	I	A	R	Y	T	D	P	Q	L	T	T	V	R	Y	P
Query Conservation		.	.	.	.	.																																																												.
Alig confidence		.	.	.	.	.																																																												.
Template Conservation
Template Sequence		X	D	G	P	V	G	A	E	N	N	Y	V	F	A	A	A	T	E	X	L	K	Q	D	D	R	P	T	A	I	X	S	G	N	D	E	X	A	I	Q	I	Y	I	A	A	X	A	L	G	L	R	I	P	Q	D	V	S	I	V	G	F	D	D	F	R	T	V	T	X	A	L	K	P	E	L	T	T	A	A	L	P
Template Known Secondary structure				S	S	T	T	S															S	T	T			S					S	S														T	T			T	T	T	T						S	B							T	T	S	S	S			B
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	S	M	A	K	L	A	T	E	L	A	L	Q	G	A	A	G	N	I	D	P	R	A	S	H	C	F	M	P	T	L	V	R	R	H	S	V	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Y	D	L	G	R	E	G	A	K	W	L	N	D	L	I	A	G	E	K	I	Y	P	G	S	R	V	V	S	C	K	L	V	E	R	S	S	A	A	F
Template Known Secondary structure																			S					S	S												S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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