Return to main results Retrieve Phyre Job Id

Job DescriptionQ46802
Confidence96.37%DateWed Jan 25 15:21:12 GMT 2012
Rank201Aligned Residues46
% Identity4%Templated1p97a_
SCOP infoProfilin-like PYP-like sensor domain (PAS domain) Hypoxia-inducible factor Hif2a, C-terminal domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   168.170.........180.........190.........200.........210...
Predicted Secondary structure 




















Query SS confidence 













































Query Sequence  NMDQGVLVVDDENRVQFVNQTALKTLGVVQNNIIGKPIRFRPLTFE
Query Conservation      

  

  
 
   
  
  


      


          
Alig confidence 













































Template Conservation   
   
     

 
  

     
 
    

 
           
Template Sequence  DSKTFLSRHSMDMKFTYCDDRITELIGYHPEELLGRSAYEFYHALD
Template Known Secondary structure 


TTTS
S
TTTSS
TTS
S
SSS
Template Predicted Secondary structure 



























Template SS confidence 













































   4.....10.........20.........30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions