Return to main results Retrieve Phyre Job Id

Job DescriptionQ46802
Confidence99.52%DateWed Jan 25 15:21:12 GMT 2012
Rank31Aligned Residues222
% Identity21%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  EQLVGECRVMRQLKRLI. . . . . . . . . . . . SRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLL
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Template Sequence  QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA. . . NAPFIKVEATKFTEVGY
Template Known Secondary structure  TT

S
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GGGGSS

S
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   338.340.........350.........360.........370....... ..380.........390.........400.....
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Query Sequence  ESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDM. . . . . . . . . . . . PLMLQAKLLRAIEAREILPIGASSPIQV
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Template Sequence  VGKEVDSIIRDLTDSAGGA. . . IDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHG. MVKTD
Template Known Secondary structure  GGGSTTTTTT
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   406...410.........420.........430.........440.........450.........460.........470.. .......480..
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Query Sequence  DIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPG. . . IAPDVVEILR
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Template Sequence  HILFIASGAFQVAR. . . PSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIA
Template Known Secondary structure  T


SSS
...GGGS
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SSTT
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   302.......310..... ....320.........330.........340.........350.........360.........370........
 
   483......490 .........500.
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Query Sequence  KHRWPGNL. . . . . . . RELSNLMEYLV
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Template Sequence  EAAFRVNEKTENIGARRLHTVMERLM
Template Known Secondary structure  S


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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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