Return to main results Retrieve Phyre Job Id

Job DescriptionQ46802
Confidence99.74%DateWed Jan 25 15:21:12 GMT 2012
Rank18Aligned Residues202
% Identity15%Templated1l8qa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270. ..... ...280.........290.........300.........310.........320.........330.........340..
Predicted Secondary structure 





.

..

























Query SS confidence 





.




. .

































































Query Sequence  EPHIEQ. LVGEC. . RVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELF
Query Conservation        .  
 
..             
     


 

 



   
  

  
     

    
           

Alig confidence 





.




..

































































Template Conservation    

   


  
                    


 







 

 


                            
Template Sequence  KYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAXVEHLKK
Template Known Secondary structure  T

SSS



TTTTTTTS
SS
SSSSSTT

Template Predicted Secondary structure 























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   343......350.........360.........370.........380 .........390.........400.........410.........420
Predicted Secondary structure 























..












Query SS confidence 





































. .







































Query Sequence  GYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLM. . LQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQF
Query Conservation 
               
    
  


 
  
  
   .. 
  
   
                  
 
  
   
  
Alig confidence 





...........




















..










..........


















Template Conservation        ...........        

 



                   ..........        
          
Template Sequence  GTINEF. . . . . . . . . . . RNXYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT. . . . . . . . . . LYLLEKQIILASDRHPQKL
Template Known Secondary structure  T
...........T
S
GGGGTT
..........TT
SS
GGG
Template Predicted Secondary structure  ...........








..........






Template SS confidence 















































































   162..... ..170.........180.........190.........200. ........210.........220
 
   421........430.........440.........450.........460.........470.........480.........490.........500
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  IAEGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYL
Query Conservation       
   
   
    
 






 


  
    
              
  
   
    




 

   
   
Alig confidence 











..
















.......










...











..













Template Conservation           
  ..                
.......
          ...
    
  

  ..  
 
 
   
  
Template Sequence  DGVSDRLVSRFE. . GGILVEIELDNKTRFKI. . . . . . . IKEKLKEFNLE. . . LRKEVIDYLLEN. . TKNVREIEGKIKLI
Template Known Secondary structure  TTS
..TS



.......TT

...

..
SS
Template Predicted Secondary structure  ..





.......


...


..


Template SS confidence 















































































   221........230.. .......240......... 250.........260 .........270.. .......280......
 
   501.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  VN
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  KL
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   287.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions