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Job DescriptionQ46802
Confidence99.33%DateWed Jan 25 15:21:12 GMT 2012
Rank39Aligned Residues210
% Identity20%Templated1iqpa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320.........330.........340..
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Query Sequence  APDEPHIEQLVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELF
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Template Sequence  KYRPQRLDDIVGQEHIVKRLKHYVKT. . GSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIRE
Template Known Secondary structure  T


STTT

S
..T


S
TTSSGGGTT
TT
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   18.20.........30.........40... ......50.........60.........70.........80.........90.....
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  GYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIA
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Template Sequence  KVKEFARTKPIGGASFK. . . . . . . . IIFLDEADALTQDAQQALRRTMEMFS. . . . . . . . . . . SNVRFILSCNY. . . . . . .
Template Known Secondary structure  S

GGG
S
........TGGGS
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   96...100.........110.. .......120.........130........ .140.........
 
   423......430.........440.........450.........460.........470.........480.........490.........500..
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Query Sequence  EGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVN
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Template Sequence  SSKIIEPIQSRCAIFRFRPLR. . . . DEDIAKRLRYIAENEG. . . . . . . LELTEEGLQAILYIA. EGDMRRAINILQAAAA
Template Known Secondary structure  GGGS
T




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.TT
T
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   150.........160.........170 .........180...... ...190.........200. ........210.......
 
   503......510.....
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Query Sequence  VVPSGEVIDSTLL
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Template Sequence  . . . LDKKITDENV
Template Known Secondary structure  ...T
S
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   218.220.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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