Job Description Q46802 Confidence 98.41% Date Wed Jan 25 15:21:12 GMT 2012 Rank 123 Aligned Residues 234 % Identity 12% Template c3te6A_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:regulatory protein sir3; PDBTitle: crystal structure of the s. cerevisiae sir3 aaa+ domain Resolution 2.80 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.
Predicted Secondary structure																						.	.																												.	.	.	.	.																	.
Query SS confidence																						.	.																												.	.	.	.	.																	.
Query Sequence		E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	.	.	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	.	.	.	.	.	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	.	P	E	Q	L	L	E	S	E	L
Query Conservation																						.	.																												.	.	.	.	.																	.
Alig confidence																						.	.																												.	.	.	.	.																	.
Template Conservation
Template Sequence		E	L	L	K	S	Q	V	E	D	F	T	R	I	F	L	P	I	Y	D	S	L	X	S	S	Q	N	K	L	F	Y	I	T	N	A	D	D	S	T	K	F	Q	L	V	N	D	V	X	D	E	L	I	T	S	S	A	R	K	E	L	P	I	F	D	Y	I	H	I	D	A	L	E	L	X	D	A	L	Y	E	K	I
Template Known Secondary structure																								T	T												S																	T	T	T	T	T	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		547	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.						.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.											.
Query SS confidence																												.	.	.	.	.											.
Query Sequence		F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	.	.	.	.	.	T	L	F	L	D	E	I	G	D	M	.	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q
Query Conservation																												.	.	.	.	.											.
Alig confidence																												.	.	.	.	.											.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	F	A	I	S	K	E	N	G	D	I	S	L	E	A	L	N	F	Y	I	T	N	V	P	K	A	K	K	R	K	T	L	I	L	I	Q	N	P	E	N	L	L	S	E	K	I	L	Q	Y	F	E	K	W	I	S	S	K	N	.	.	.	.	.	.	.	.	.	.	.	S	K	L	S	I	I	C	V	G	G	H
Template Known Secondary structure						S																		S		G	G	G	S											S	S	S			T													S	S	.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.												.	.	.	690	.	.	.	.	.	.	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.																					470	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	G	I	A	P
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.						.																							.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.						.																							.	.
Template Sequence		.	.	N	V	T	I	R	.	E	Q	I	N	I	X	P	S	L	K	A	H	F	T	E	I	K	L	N	K	V	D	.	.	K	N	E	L	Q	Q	X	I	I	T	R	L	K	S	L	L	K	P	F	H	V	K	V	N	D	K	K	E	X	T	I	Y	N	N	I	P	D	N	V	I	V	I	N	H	K	I	N	N
Template Known Secondary structure		.	.	S					.					T						T	T											.	.																									T	T											T	T
Template Predicted Secondary structure		.	.						.																							.	.
Template SS confidence
				700	.	.	.	.		.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.			.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
		476	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.												.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	V	E	I	L	R	K	H	.	.	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y	L	V	N	V	V	.	.	.	.	.	.	.	.	.	.	.	P	S	G	E	V	I	D	S	T	L	L	P	P	N	L
Query Conservation											.	.																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	T	Q	L	I	A	K	N	V	A	N	V	S	G	S	T	E	K	A	F	K	I	C	E	A	A	V	E	I	S	K	K	D	F	V	R	K	G	G	L	Q	K	G	K	L	V	V	S	Q	E	X	V	P	R	Y	F
Template Known Secondary structure																	S																							T	T			T	T					S					T
Template Predicted Secondary structure
Template SS confidence
		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions