Job Description Q46802 Confidence 97.37% Date Wed Jan 25 15:21:12 GMT 2012 Rank 175 Aligned Residues 175 % Identity 14% Template c3qmzA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain Resolution 6.00 Å

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		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D
Query Conservation
Alig confidence																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	F	F	G	P	A	G	T	G	K	T	E	T	V	K	A	F	G	Q	N	.	.	.	L	G	R	V	V	V	V	F	N	C	D	D	S	F	D	Y	Q	V	L	S	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	I	T	Q	I	G	A	W	G	C	F	D	E	F	N	R
Template Known Secondary structure							T	T	S	S									T	S	S	.	.	.											S	S	S	S		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T								T	T	T	T
Template Predicted Secondary structure																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1793	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.				.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.																		.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390										.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		M	P	L	M	L	Q	A	K	L	L	R	A	I	E	.	.	.	.	.	.	.	.	.	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.															.					.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.															.					.
Template Sequence		L	D	E	K	V	L	S	A	V	S	A	N	I	Q	Q	I	Q	N	G	L	Q	V	G	K	S	H	I	T	L	L	E	E	E	T	P	L	S	P	H	T	A	V	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	L	P	E	N	L	K	K	S	F	R	E	F	S	M	.	K	S	Q	S	.	G	T
Template Known Secondary structure		S	S																	T	S	T	T	S	S	S						S	S															.	.	.	.	.	.	.	.	.	.	.	.							T	T	T						.					.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.															.					.
Template SS confidence
		1853	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.													.	1900	.	.	.	.	.	.	.	.	.	1910	.	.		.	.	.	.		.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460			.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		Q	E	D	I	E	L	L	V	H	Y	F	L	H	.	.	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y	L	V	N	V	V	P	S	G	E
Query Conservation															.	.
Alig confidence															.	.									.																			.	.
Template Conservation																									.																			.	.
Template Sequence		I	A	E	M	I	L	Q	I	M	G	F	E	D	S	K	S	L	A	S	K	I	V	H	.	F	L	E	L	L	S	S	K	C	S	S	M	N	H	Y	H	F	G	.	.	L	R	T	L	K	G	V	L	R	N	C	S	P	L	I	S	E	F	G
Template Known Secondary structure												T	S	S											.											S	S	S						.	.																		S	S
Template Predicted Secondary structure																									.																			.	.
Template SS confidence
		1929	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.		.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.			1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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