Job Description Q46802 Confidence 90.94% Date Wed Jan 25 15:21:12 GMT 2012 Rank 390 Aligned Residues 135 % Identity 15% Template c3obfA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:putative transcriptional regulator, iclr family; PDBTitle: crystal structure of putative transcriptional regulator, iclr family;2 targeted domain 129...302 Resolution 2.16 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																											.	.	.									.	.	.	.	.
Query SS confidence																											.	.	.									.	.	.	.	.
Query Sequence		M	Q	I	Q	P	T	I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	V	E	I	V	.	.	.	D	E	N	L	C	R	V	A	.	.	.	.	.	G	T	G	A	Y	G	K	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	L	E	T	K	T	E	K	V	V	T	Q	S	R	F	D	P
Query Conservation																											.	.	.									.	.	.	.	.
Alig confidence																											.	.	.									.	.	.	.	.
Template Conservation
Template Sequence		A	E	E	R	R	V	A	Y	P	V	L	R	E	L	T	E	R	T	G	E	T	S	A	L	X	V	W	N	G	N	E	S	X	C	V	E	Q	I	P	S	R	H	Q	V	K	H	L	A	P	L	G	A	R	Y	N	E	A	L	S	S	S	V	Q	V	F	L	A	S	E	N	E	D	R	V	R	Q	L	L	R	S
Template Known Secondary structure																				S	S									S	S											T	T		S	S			S		T	T					B	T	T	S									T	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		83	.	.																										.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Query Sequence		L	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	D	S	K	E	N	C	R	E	K	A	F	L	G	T	P	V	I	L	.	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H	I	S	D	N	L	R	E	F	S	D	Y
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.																	.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		G	S	I	T	L	T	G	V	D	E	D	A	V	E	A	Y	L	L	R	L	K	E	S	X	E	R	G	W	A	V	N	F	G	E	T	S	I	E	E	V	G	V	A	S	P	V	Y	D	H	R	G	N	X	V	A	S	V	L	I	P	A	P	K	F	R	.	.	.	V	S	Q	D	T	L	N	S	L	G	E	A
Template Known Secondary structure		T	S	S	B		T	T																				T	S					S	S	S	S	T	T											T	T	S												G	G	G	.	.	.
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.	.	.	.	.	280	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	H	I	S	T	I	F	V	S	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	A	A	A	A	K	V	T	T	R	L
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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