Return to main results Retrieve Phyre Job Id

Job DescriptionQ46802
Confidence98.94%DateWed Jan 25 15:21:12 GMT 2012
Rank78Aligned Residues132
% Identity14%Templatec3mmhA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:methionine-r-sulfoxide reductase; PDBTitle: x-ray structure of free methionine-r-sulfoxide reductase from2 neisseria meningitidis in complex with its substrate
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30. ........40.........50.........60.........70.........80........
Predicted Secondary structure 


...
































Query SS confidence 



















. . .
























































Query Sequence  QIQPTIQRFARMLASVLQLE. . . VEIVDENLCRVAGTGAYGKFLGRQLSGNSRLLRHVLETKTEKVVTQSRFDPLCEGCD
Query Conservation 

   

  
  
   
  
...
 


     

  
     

          
 

  
    
 
           
Alig confidence 



















...
























































Template Conservation 
    
  
   
          
   
                                        
           
Template Sequence  DWVANLANTAAVLKEAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDAHPDHIACS
Template Known Secondary structure 


STTTTSS


STTSTS
S
GGGSTT


SS
Template Predicted Secondary structure 




































Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100.........110
 
   8990.........100.........110.........120.........130.........140.........
Predicted Secondary structure 












Query SS confidence 




























































Query Sequence  SKENCREKAFLGTPVILQDRCVGVISLIAVTHEQQEHISDNLREFSDYVRHISTIFVSKLL
Query Conservation          
 
 


   
 




 
                        

  
   
 
Alig confidence 
....




























..
























Template Conservation   ....   
 
 


       


 
       ..
   
  

  

  

 





 
Template Sequence  S. . . . LSRSEIVVPLFSDGRCIGVLDADSEHLAQ. . FDETDALYLGELAKILEKRFEASRQ
Template Known Secondary structure  T....T

TTSSTT
..

Template Predicted Secondary structure 
....











..

Template SS confidence 




























































   111 ........120.........130.........140 .........150.........160.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions