Job Description Q46802 Confidence 99.16% Date Wed Jan 25 15:21:12 GMT 2012 Rank 55 Aligned Residues 222 % Identity 16% Template c3h4mC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:proteasome-activating nucleotidase; PDBTitle: aaa atpase domain of the proteasome- activating nucleotidase Resolution 3.11 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290												.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	A	P	D	E	P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	.	.	.	.	.	.	.	.	.	.	.	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		V	D	E	R	P	N	V	R	Y	E	D	I	G	G	L	E	K	Q	M	Q	E	I	R	E	V	V	E	L	P	L	K	H	P	E	L	F	E	K	V	G	I	E	P	P	K	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	L	A	K	A	V	A	T	E	.	.	.	T	N	A	T	F	I	R	V	V	G
Template Known Secondary structure				S	S					G	G	G			S										T	T	T	T													T					S						S	S	S	S	S	S												.	.	.	T	T								G
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.															.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.																																																															.	.	.	.
Template Sequence		S	E	L	V	.	.	.	.	.	.	.	.	.	.	K	K	F	I	G	E	G	A	S	L	V	K	D	I	F	K	L	A	K	E	K	A	P	S	I	I	F	I	D	E	I	D	A	I	A	A	K	R	T	D	A	L	T	G	G	D	R	E	V	Q	R	T	L	M	Q	L	L	A	E	M	D	G	.	.	.	.
Template Known Secondary structure		G	G	S		.	.	.	.	.	.	.	.	.	.			S	T	T	T	T	T													T		S								G	G	G	T	S	B			S	S	S				S	T														T	T	S	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																																															.	.	.	.
Template SS confidence
		238	.	240	.											.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P
Query Conservation
Alig confidence		.	.	.	.	.																.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	F	D	A	R	G	D	V	K	I	I	G	A	T	N	R	.	.	.	.	.	.	.	P	D	I	L	D	P	A	I	L	R	P	G	R	F	D	R	I	I	E	V	P	A	P	D	.	E	K	G	R	L	E	I	L	K	I	H	T	.	.	.	.	.	.	.	.	R	K	M	N	L	A	E	D
Template Known Secondary structure		.	.	.	.	.	S		S	S	S	S								S	S	.	.	.	.	.	.	.	G	G	G	B						S	T	T	S												.											T	T	.	.	.	.	.	.	.	.	T	T	S		B		S	S
Template Predicted Secondary structure		.	.	.	.	.																.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.
Template SS confidence
							304	.	.	.	.	.	310	.	.	.	.	.	.	.	.								.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.									.	.	.	.	.	360	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	V	V	E	I	L	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y	L	V	.	.	N	V	V	P	S	G	E	V	I	D	S	T	L	L	P	P	N	L	L
Query Conservation																												.	.
Alig confidence																												.	.
Template Conservation
Template Sequence		V	N	L	E	E	I	A	K	M	T	E	G	C	V	G	A	E	L	K	A	I	C	T	E	A	G	M	N	A	I	R	E	L	R	D	Y	V	T	M	D	D	F	R	K	A	V	E
Template Known Secondary structure									T	T	S	T	T																				T	T		S	S	B
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions