Job Description Q46802 Confidence 95.84% Date Wed Jan 25 15:21:12 GMT 2012 Rank 211 Aligned Residues 118 % Identity 8% Template c3e98B_ PDB info PDB header:unknown function Chain: B: PDB Molecule:gaf domain of unknown function; PDBTitle: crystal structure of a gaf domain containing protein that belongs to2 pfam duf484 family (pa5279) from pseudomonas aeruginosa at 2.43 a3 resolution Resolution 2.43 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		Q	I	Q	P	T	I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	.	.	.	V	E	I	V	D	E	N	L	C	R	V	A	G	T	G	A	Y	G	K	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	L	E	T	K	T	E	K	V	V	T	Q	S	R	F	D	P	L	C	E	G	C	D
Query Conservation																						.	.	.
Alig confidence																						.	.	.																					.	.	.																														.	.	.	.	.
Template Conservation																																													.	.	.																														.	.	.	.	.
Template Sequence		S	L	E	D	V	V	S	T	V	E	D	S	L	R	H	E	F	Q	V	P	Y	V	S	L	I	L	F	S	D	S	R	S	V	S	S	A	E	A	H	Q	A	I	G	.	.	.	G	L	L	S	G	K	T	V	C	G	V	L	R	P	H	E	L	A	F	L	F	G	E	S	D	R	D	E	I	.	.	.	.	.
Template Known Secondary structure		S															T	S			S																							T	.	.	.	T	S									S																T	T		.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.																														.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	E	N	C	R	E	K	A	F	L	G	T	P	V	I	L	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H	I	S	D	N	L	R	E	F	S	D	Y	V	R	H	I	S	T	I	F	V	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.										.																			.
Template Conservation		.	.	.	.	.	.	.										.																			.
Template Sequence		.	.	.	.	.	.	.	G	S	A	A	V	V	S	L	S	.	F	Q	G	L	H	G	V	L	A	I	G	S	P	D	P	Q	H	Y	.	K	S	S	L	G	T	L	F	L	G	Y	V	A	E	V	L	A	R	V	L	P	R
Template Known Secondary structure		.	.	.	.	.	.	.	S									.	S	S	S										S	S	T	T	T	T	.	S	S	T	T	T	T														G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.										.																			.
Template SS confidence
									176	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions