Job Description Q46802 Confidence 93.02% Date Wed Jan 25 15:21:12 GMT 2012 Rank 320 Aligned Residues 126 % Identity 13% Template c3bjnA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, putative; PDBTitle: crystal structure of c-terminal domain of putative transcriptional2 regulator from vibrio cholerae, targeted domain 79-240 Resolution 1.65 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.																			.	.
Predicted Secondary structure																							.	.	.																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	V	E	I	V	.	.	.	D	E	N	L	C	R	V	A	G	T	G	A	Y	G	K	.	.	.	.	.	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E
Query Conservation																							.	.	.																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	E	A	V	L	S	R	L	Q	K	Q	T	G	E	X	A	A	Y	X	V	P	V	G	Y	R	A	L	C	V	S	Q	R	E	S	X	Q	A	L	R	C	S	F	V	Q	G	Q	S	Q	P	L	L	R	G	A	S	S	K	V	X	L	A	Y	X	P	A	A	R	C	E	K	I	L	R	Y	F	G	E	D
Template Known Secondary structure																S	S									T	T											S	S					S			T	T					T	T	S											S												T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		T	K	T	E	K	V	V	T	Q	S	R	F	D	P	L	C	E	G	C	D	S	K	E	N	C	R	E	.	K	A	F	L	G	T	P	V	I	L	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H	I	S	D	N	L	R	E	F	S	D	Y	V	R	H	I
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		P	T	L	D	K	W	Q	S	E	F	E	K	I	R	R	H	G	Y	A	V	S	T	S	E	I	D	P	G	V	S	G	I	S	A	P	V	X	K	G	S	K	L	I	G	A	I	S	V	X	A	P	A	H	R	V	E	S	N	K	Q	R	I	I	L	H	V	L	Q	A	A	R	A	L
Template Known Secondary structure		T	T	S														T	S					S	S	S	S	T	T											T	T																																T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions