Job Description Q46802 Confidence 98.92% Date Wed Jan 25 15:21:12 GMT 2012 Rank 81 Aligned Residues 195 % Identity 16% Template c2qz4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp Resolution 2.22 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	.	.	.	.	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																												.	.	.																						.	.
Template Conservation																																																								.	.	.																						.	.
Template Sequence		V	S	F	K	D	V	A	G	M	H	E	A	K	L	E	V	R	E	F	V	D	Y	L	K	S	P	E	A	K	V	P	K	G	A	L	L	L	G	P	P	G	C	G	K	T	L	L	A	K	A	V	A	T	E	.	.	.	A	Q	V	P	F	L	A	M	A	G	A	E	F	V	E	V	I	G	G	L	G	.	.
Template Known Secondary structure				T	T	S	S		S																														S		T	T	S	S												.	.	.		T								T	T	T	T	S	S	S	S	T	T			.	.
Template Predicted Secondary structure																																																								.	.	.																						.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		.	.	.	.	.	.	.	.	A	A	R	V	R	S	L	F	K	E	A	R	A	R	A	P	C	I	V	Y	I	D	E	I	E	Q	T	L	N	Q	L	L	V	E	M	D	G	M	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	V	I	V	L	A	S	T	N	R	.	.	A	D	I	L	D
Template Known Secondary structure		.	.	.	.	.	.	.	.														T		S																					T			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.										S		.	.	G	G	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
										387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.														.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y	L	V
Query Conservation
Alig confidence														.	.	.	.									.	.															.	.	.	.	.	.
Template Conservation														.	.	.	.									.	.															.	.	.	.	.	.
Template Sequence		G	A	L	M	R	P	G	R	L	D	R	H	.	.	.	.	V	F	I	D	L	P	T	L	.	.	Q	E	R	R	E	I	F	E	Q	H	L	K	S	L	.	.	.	.	.	.	K	L	T	Q	S	S	T	F	Y	S	Q	R	L	A	E	L	T	P	G	F	S	G	A	D	I	A	N	I	C	N	E	A	A
Template Known Secondary structure		S	G	G	G	S	T	T	S					.	.	.	.					S				.	.														T	.	.	.	.	.	.	T			B	T											T		T	T
Template Predicted Secondary structure														.	.	.	.									.	.															.	.	.	.	.	.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.					.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.	.	.	.	.	.							.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions