Job Description Q46802 Confidence 98.44% Date Wed Jan 25 15:21:12 GMT 2012 Rank 116 Aligned Residues 135 % Identity 12% Template c2qybA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:membrane protein, putative; PDBTitle: crystal structure of the gaf domain region of putative membrane2 protein from geobacter sulfurreducens pca Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																						.	.	.												.	.	.	.
Query SS confidence																						.	.	.												.	.	.	.
Query Sequence		Q	I	Q	P	T	I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	.	.	.	V	E	I	V	D	E	N	L	C	R	V	.	.	.	.	A	G	T	G	A	Y	G	K	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	L	E	T	K	T	E	K	V	V	T	Q	S	R	F	D	P	L	C
Query Conservation																						.	.	.												.	.	.	.
Alig confidence																						.	.	.												.	.	.	.
Template Conservation
Template Sequence		D	L	Q	I	I	X	D	D	L	L	N	L	L	L	K	E	F	K	L	D	L	A	V	I	R	L	V	D	E	K	G	V	L	R	V	R	S	Y	S	G	K	G	I	A	G	I	A	G	K	D	W	E	P	E	I	E	T	Y	I	G	E	A	F	L	S	N	R	L	Q	F	V	N	D	T	Q	Y	X	T	K	P
Template Known Secondary structure																		S	S		S									T	T	S										S		T	T	S	T	T		S		B				T	T	S									T	S					S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	C	D	S	K	E	N	C	R	E	K	A	F	L	G	T	P	V	I	L	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H	I	S	D	N	L	R	E	F	S	D	Y	V	R	H	I	S	T	I	F	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	R	E	L	X	Q	K	E	G	I	K	S	F	A	H	I	P	I	S	R	K	G	E	P	P	F	G	I	L	S	V	F	S	R	T	I	V	G	L	F	N	E	P	F	L	N	L	L	E	S	L	A	G	Q	L	A	Q	A	V	K	I
Template Known Secondary structure										T	T												T	T	S											S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions