Job Description Q46802 Confidence 98.99% Date Wed Jan 25 15:21:12 GMT 2012 Rank 74 Aligned Residues 233 % Identity 15% Template c2qbyA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:cell division control protein 6 homolog 1; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus) Resolution 3.35 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																												.	.																													.	.	.
Query SS confidence																												.	.																													.	.	.
Query Sequence		E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	.	.	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	.	.	.	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y
Query Conservation																												.	.																													.	.	.
Alig confidence																												.	.																													.	.	.
Template Conservation
Template Sequence		D	E	L	P	H	R	E	D	Q	I	R	K	I	A	S	I	L	A	P	L	Y	R	E	E	K	P	N	N	I	F	I	Y	G	L	T	G	T	G	K	T	A	V	V	K	F	V	L	S	K	L	H	K	K	F	L	G	K	F	K	H	V	Y	I	N	T	R	Q	I	D	T	P	Y	R	V	L	A	D	L	L	E
Template Known Secondary structure		S			T	T											S	S	G	G	G	G	G	T												T	T	S	S																T		S	S													S									T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.									.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	.	.	.	.	.	.	.	.	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		S	L	D	V	K	V	P	F	T	G	L	S	I	A	E	L	Y	R	R	L	V	K	A	V	R	D	Y	G	S	Q	V	V	I	V	L	D	E	I	D	A	F	V	K	K	Y	N	D	D	I	L	Y	K	L	S	R	I	N	.	.	.	.	.	.	.	.	S	E	V	N	K	I	S	F	I	G	I	T	N	D	V
Template Known Secondary structure		T	T	S					S	S	S																T			S								T							S	S		S	T										.	.	.	.	.	.	.	.		S											S		G
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.			.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	.	.	H	R	W	P	G	N	L	R	E	L	S
Query Conservation																																																																					.	.
Alig confidence				.	.	.	.																									.	.																.	.	.	.	.																.	.
Template Conservation				.	.	.	.																									.	.																.	.	.	.	.
Template Sequence		K	F	.	.	.	.	V	D	L	L	D	P	R	V	K	S	S	L	S	E	E	E	I	I	F	P	P	Y	N	A	.	.	E	E	L	E	D	I	L	T	K	R	A	Q	M	A	F	.	.	.	.	.	K	P	G	V	L	P	D	N	V	I	K	L	C	A	A	L	A	A	R	E	H	G	D	A	R	R	A	L
Template Known Secondary structure		G	G	.	.	.	.	G	G	G		T	T					T	T	T	T											.	.															B	.	.	.	.	.		S	S		S															T	T
Template Predicted Secondary structure				.	.	.	.																									.	.																.	.	.	.	.
Template SS confidence
		185	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		495	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		N	L	M	E	Y	L	V	N	V	V	.	.	P	S	G	E	V	I	D	S	T	L	L	P	P	N	L	L	N
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		D	L	L	R	V	S	G	E	I	A	E	R	M	K	D	T	K	V	K	E	E	Y	V	Y	M	A	K	E	E
Template Known Secondary structure														T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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