Job Description Q46802 Confidence 90.12% Date Wed Jan 25 15:21:12 GMT 2012 Rank 419 Aligned Residues 54 % Identity 11% Template c2pdtD_ PDB info PDB header:circadian clock protein Chain: D: PDB Molecule:vivid pas protein vvd; PDBTitle: 2.3 angstrom structure of phosphodiesterase treated vivid Resolution 2.20 Å

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		169	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		M	D	Q	G	V	L	V	V	D	.	.	.	D	E	N	R	V	Q	F	V	N	Q	T	A	L	K	T	L	G	V	V	Q	N	N	I	I	G	K	P	I	R	F	R	P	L	T	F	E	S	N	F	T	H	G	H	M	Q
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		T	S	C	A	L	I	L	C	D	L	K	Q	K	D	T	P	I	V	Y	A	S	E	A	F	L	Y	M	T	G	Y	S	N	A	E	V	L	G	R	N	C	R	F	L	Q	S	P	D	G	M	V	K	P	K	S	T	R	K
Template Known Secondary structure		T	T	S	S						T	T	S	T	T																		S	T	T	T	T	T	S		G	G	G	G	G	S	T	T	S				T	T				S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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