Job Description Q46802 Confidence 99.12% Date Wed Jan 25 15:21:12 GMT 2012 Rank 58 Aligned Residues 162 % Identity 17% Template c2p65A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pf08_0063; PDBTitle: crystal structure of the first nucleotide binding domain of2 chaperone clpb1, putative, (pv089580) from plasmodium vivax Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		R	A	G	K	L	D	P	V	I	G	R	D	T	E	I	R	R	A	I	Q	I	L	S	R	.	.	R	T	K	N	N	P	I	L	L	G	D	P	G	V	G	K	T	A	I	V	E	G	L	A	I	K	I	V	Q	G	D	V	P	D	S	L	K	G	R	K	L	V	S	L	D	L	S	S	L	I	A	G	A	K
Template Known Secondary structure			T	T		S					S													T	S	.	.	S	S	S							S		G	G	G															T	T		S		T	T	T	T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.										.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence		V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	.	.	.	.	.	.	.	.	.	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	G	D	F	E	E	R	L	K	S	I	L	K	E	V	Q	D	A	E	G	Q	V	V	M	F	I	D	E	I	H	T	V	V	G	A	G	A	V	A	E	G	A	L	D	A	G	N	I	L	K	P	M	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	R	C	I	G	A	T	T	V
Template Known Secondary structure		S																		T	T	T	S						T	T	G	G	G	G	S	S	S	S	S	S		T	T	S			T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150														.	.	.	.	.	.	.	.	.	160	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	S	E	Y	R	Q	F	I	E	K	D	K	A	L	E	R	R	F	Q	Q	I	L	V	E	Q	P	S
Template Known Secondary structure		.	.							T	T	T															S
Template Predicted Secondary structure		.	.
Template SS confidence
				162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions