Job Description Q46802 Confidence 99.17% Date Wed Jan 25 15:21:12 GMT 2012 Rank 53 Aligned Residues 136 % Identity 23% Template c2kjqA_ PDB info PDB header:replication Chain: A: PDB Molecule:dnaa-related protein; PDBTitle: solution structure of protein nmb1076 from neisseria meningitidis.2 northeast structural genomics consortium target mr101b. Resolution UNK

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		265	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		D	E	P	H	I	E	Q	.	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G
Query Conservation									.
Alig confidence									.															.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	P	S	F	D	K	F	L	G	T	E	N	A	E	L	V	Y	V	L	R	H	.	.	.	.	.	K	H	G	Q	F	I	Y	V	W	G	E	E	G	A	G	K	S	H	L	L	Q	A	W	V	A	Q	A	L	E	A	G	K	N	A	A	Y	I	D	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S			T										.	.	.	.	.				S						S	S	S	T	T	T	T													T	T	T								T	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	L	T	D	A	A	F	E	A	E	Y	L	A	V	D	Q	V	E	K	L	G	N	E	E	Q	A	L	L	F	S	I	F	N	R	.	.	.	.	.	.	.	.	.	F	R	N	S	G	K	G	F	L	L	L	G	S	E	Y	T	P	Q	.	.	.	.	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	S				G	G	G	G	G		S						S	T	T				S													.	.	.	.	.	.	.	.	.					T									S	S		T	T	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																			.	.	.	.
Template SS confidence
															75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.										110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.
		424	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	K	F	R	E	D	L	F	Y	R	L	N	.	V	I	P	I	T	L	P	P
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		L	V	I	R	E	D	L	R	T	R	M	A	Y	C	L	V	Y	E	V	K	P
Template Known Secondary structure		S	S									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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