Job Description Q46802 Confidence 89.46% Date Wed Jan 25 15:21:12 GMT 2012 Rank 442 Aligned Residues 97 % Identity 20% Template c2jlrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp Resolution 2.0 Å

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		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	.	.	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T
Query Conservation																					.	.
Alig confidence																					.	.																					.	.	.	.	.
Template Conservation																																											.	.	.	.	.
Template Sequence		I	F	R	K	K	R	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	I	L	P	S	I	V	R	E	A	L	K	R	R	L	R	T	L	I	L	A	.	.	.	.	.	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	T	P	A	V	K	S	D	H	T	G	R	E	I
Template Known Secondary structure		T	T	S	T	T									T	T	S	S	T	T	T	T												T	T								.	.	.	.	.	S	S											T	T	T	S							T	T	S	S					S	S	S
Template Predicted Secondary structure																																											.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
																								367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	L	M	C	H	A	T	F	T	T	R	L	L	S	S	T	R	V	P	N	Y	N	L	I	V	M	D	E	A	H	F	T	D	P	C	S	V	A	A	R	G	Y	I	S	T
Template Known Secondary structure																		S						S						S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions