Job Description Q46802 Confidence 99.65% Date Wed Jan 25 15:21:12 GMT 2012 Rank 20 Aligned Residues 201 % Identity 15% Template c2hcbC_ PDB info PDB header:replication Chain: C: PDB Molecule:chromosomal replication initiator protein dnaa; PDBTitle: structure of amppcp-bound dnaa from aquifex aeolicus Resolution 3.51 Å

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		265	.	.	.	.	270	.		.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure									.				.	.
Query SS confidence									.				.	.
Query Sequence		D	E	P	H	I	E	Q	.	L	V	G	.	.	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E	S	E	L
Query Conservation									.				.	.
Alig confidence									.				.	.
Template Conservation
Template Sequence		P	K	Y	T	L	E	N	F	I	V	G	E	G	N	R	L	A	Y	E	V	V	K	E	A	L	E	N	L	G	S	L	Y	N	P	I	F	I	Y	G	S	V	G	T	G	K	T	H	L	L	Q	A	A	G	N	E	A	K	K	R	G	Y	R	V	I	Y	S	S	A	D	D	F	A	Q	A	M	V	E	H	L	K
Template Known Secondary structure		T	T			S	S	S	S				T	T	T										T	T	T	T	T	T	T	S									S	S	S	S	S															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.														.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.														.
Template Sequence		K	G	T	I	N	E	F	.	.	.	.	.	.	.	.	.	.	.	R	N	M	Y	K	S	V	D	L	L	L	L	D	D	V	Q	F	L	S	G	K	E	R	T	Q	I	E	F	F	H	I	F	N	T	L	Y	L	L	E	K	.	.	.	.	.	.	.	.	Q	I	I	L	A	S	D	R	H	P	Q	K	L	.
Template Known Secondary structure			T						.	.	.	.	.	.	.	.	.	.	.						T		S							G	G	G	G	T	T		S																T	T		.	.	.	.	.	.	.	.							S	S		G	G	G		.
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.														.
Template SS confidence
		161	.	.	.	.	.	.												.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	.	.	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y
Query Conservation																						.	.
Alig confidence		.	.																			.	.									.	.	.	.	.	.	.	.													.	.	.												.	.
Template Conservation		.	.																													.	.	.	.	.	.	.	.													.	.	.												.	.
Template Sequence		.	.	D	G	V	S	D	R	L	V	S	R	F	E	G	G	I	L	V	E	I	E	L	D	N	K	T	R	F	K	.	.	.	.	.	.	.	.	I	I	K	E	K	L	K	E	F	N	L	E	.	.	.	L	R	K	E	V	I	D	Y	L	L	E	.	.	N	T	K	N	V	R	E	I	E	G	K	I	K	L
Template Known Secondary structure		.	.	T	T	S											S									S						.	.	.	.	.	.	.	.									T	T			.	.	.												.	.				S
Template Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.													.	.	.												.	.
Template SS confidence
				221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.
		500
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		286

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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