Job Description Q46802 Confidence 96.28% Date Wed Jan 25 15:21:12 GMT 2012 Rank 202 Aligned Residues 130 % Identity 9% Template c2gx5B_ PDB info PDB header:transcription Chain: B: PDB Molecule:gtp-sensing transcriptional pleiotropic repressor cody; PDBTitle: n-terminal gaf domain of transcriptional pleiotropic repressor cody Resolution 1.74 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	V	E	I	V	D	E	N	L	C	R	V	A	G	T	G	A	Y	G	.	.	.	.	.	.	K	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	L	E	T	K	T	E	K	V	V	T	Q	S	R	F	D	P	L	C	E	G	C	D	S	K
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.																																						.
Template Conservation																																																																														.
Template Sequence		F	K	E	M	A	E	T	L	R	D	V	I	D	S	N	I	F	V	V	S	R	R	G	K	L	L	G	Y	S	I	N	Q	Q	I	E	N	D	R	M	K	K	M	L	E	D	R	Q	F	P	E	E	Y	T	K	N	L	F	N	V	P	E	T	S	S	N	L	D	I	N	S	E	T	A	F	P	V	.	E	N	R
Template Known Secondary structure														T	S							T	T	S	B							S	S														T	B											T			S							T	T					S		G	.	G	G	G
Template Predicted Secondary structure																																																																														.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	C	R	E	K	A	F	L	G	T	P	V	I	L	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H	I	S	D	N	L	R	E	F	S	D	Y	V	R	H	I	S	T	I	F	V	S	K	L	L	E	D	Q	G	P
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		D	L	F	Q	A	G	L	T	T	I	V	P	I	I	G	G	G	E	R	L	G	T	L	I	L	S	R	L	Q	D	Q	F	N	.	.	.	.	.	.	.	D	D	D	L	I	L	A	E	Y	G	A	T	V	V	G	M	E	I	L	R	E	K	A	E
Template Known Secondary structure		G	G	G	S	S	S										T	T											S	S					.	.	.	.	.	.	.																							T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions