Job Description Q46802 Confidence 95.98% Date Wed Jan 25 15:21:12 GMT 2012 Rank 205 Aligned Residues 132 % Identity 14% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																.	.	.						.	.
Query SS confidence																																																.	.	.						.	.
Query Sequence		V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	.	.	.	F	I	A	I	N	.	.	C	A	A	I	P	E	Q	L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A
Query Conservation																																																.	.	.						.	.
Alig confidence															.	.																																.	.	.						.	.
Template Conservation															.	.
Template Sequence		Q	L	E	T	L	K	R	I	I	E	K	S	E	.	.	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T
Template Known Secondary structure												T		S	.	.	S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Sequence		R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	I	V	H	D	C	E	R	X	T	Q	Q	A	A	N	A	F	L	K	A	L	E	E	.	.	.	.	.	.	.	.	.	.	.	P	P	E	Y	A	V	I	V	L	N	T	R	R	.	.	.	.	.	.	.	W	H	Y	L	L	P	T	I	K	S
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	G	G	G	B								T						S	.	.	.	.	.	.	.	.	.	.	.			T	T								S		.	.	.	.	.	.	.	G	G	G	S						T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		90	.														.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	V	I	P	I	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	F	R	V	V	V	N	V	P
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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