Job Description Q46802 Confidence 88.44% Date Wed Jan 25 15:21:12 GMT 2012 Rank 480 Aligned Residues 146 % Identity 13% Template c2g7uB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:transcriptional regulator; PDBTitle: 2.3 a structure of putative catechol degradative operon regulator from2 rhodococcus sp. rha1 Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.														.	.	.	.	.																				.	.	.	.	.
Query SS confidence																																					.	.	.														.	.	.	.	.																				.	.	.	.	.
Query Sequence		M	E	L	A	T	T	Q	S	V	L	M	Q	I	Q	P	T	I	Q	R	F	A	R	M	L	A	S	V	L	Q	L	E	V	E	I	V	.	.	.	D	E	N	L	C	R	V	A	G	T	G	A	Y	.	.	.	.	.	G	K	F	L	G	R	Q	L	S	G	N	S	R	L	L	R	H	V	L	.	.	.	.	.
Query Conservation																																					.	.	.														.	.	.	.	.																				.	.	.	.	.
Alig confidence																																					.	.	.														.	.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		L	S	I	G	Q	H	Y	S	E	S	H	A	L	I	E	A	A	X	P	R	L	L	E	V	A	E	K	T	Q	E	S	A	S	L	G	V	L	D	G	A	D	V	V	Y	A	A	R	V	P	V	R	R	I	X	S	I	N	V	S	V	G	T	R	V	P	A	Y	A	T	S	X	G	R	A	L	L	A	W	A	P
Template Known Secondary structure											T																			S	S									T	T													S	S						T	T					S	T	T	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
											68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.													.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	.	.	.	E	T	K	T	E	K	V	V	T	Q	S	R	F	D	P	L	C	.	.	.	.	.	.	.	.	.	.	.	.	E	G	C	D	S	K	E	N	C	R	E	K	A	F	L	G	T	P	V	I	L	.	Q	D	R	C	V	G	V	I	S	L	I	A	V	T	H	E	Q	Q	E	H
Query Conservation		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.																						.																			.	.
Template Conservation																																																																																.	.
Template Sequence		A	D	V	V	E	R	V	V	A	E	S	T	F	Q	K	L	G	P	E	T	I	G	T	A	A	E	L	E	R	E	L	A	K	V	R	E	Q	G	F	A	L	T	S	E	E	L	E	K	G	L	I	S	L	A	A	P	V	H	D	A	G	G	T	V	V	G	V	V	A	C	S	T	S	S	A	R	N	T	.	.
Template Known Secondary structure																		S	T	T																			S	S					S	S	S	S	T	T											T	T	S												T	T	T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	D	N	L	R	E	F	S	D	Y	V	R	H	I	S	T	I	F	V	S	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	Q	F	R	E	Q	A	V	P	C	V	L	A	A	A	A	A	L	S	A	D	X
Template Known Secondary structure																								T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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