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Job DescriptionQ46802
Confidence99.85%DateWed Jan 25 15:21:12 GMT 2012
Rank9Aligned Residues226
% Identity17%Templatec1r6bX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280.........290 .........300.........310.........320.........330.........340..
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Query Sequence  EQLVGECRVMRQLKRLISRIA. . . . . . . PSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELF
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Template Sequence  MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKA. . . LGIELLRFDMSEYMERHTVSRLI
Template Known Secondary structure  TTS
S
TT
S
TTS
S
STTSS...T
GGG
SSSS

SSS
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   458.460.........470.........480.........490.........500.........510. ........520.........530....
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  GYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIA
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Template Sequence  GAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAMEE
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S
STT
SSTGGGS
STTT
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   535....540.........550.........560.........570.........580.........590.........600.........610....
 
   423......430.........440.........450.........460.........470.. .......480... ......490.......
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Query Sequence  . EGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSVYPG. . IAPDVVEILRK. . HRWPGNLRELSNLM
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Template Sequence  IKKIFTPEFRNRLDNI. IWFDHLS. . TDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVI
Template Known Secondary structure  S
TT
S.




..TT

BTTTBTTT
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   632.......640....... ..650.... .....660.........670.........680.........690.........700........
 
   498.500.
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Query Sequence  EYLV
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Template Conservation     
Template Sequence  QDNL
Template Known Secondary structure 
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   709710..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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