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Job DescriptionQ46802
Confidence99.84%DateWed Jan 25 15:21:12 GMT 2012
Rank10Aligned Residues215
% Identity19%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   270.........280......... 290.........300.........310.........320.........330.........340..
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Query Sequence  EQLVGECRVMRQLKRLISRI. . . . . . . APSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAAIPEQLLESELF
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Template Sequence  KRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLQ
Template Known Secondary structure  TTS
S
GGGTS
SSS
SBSSSSSSSSGGG
TTT

SSGGGGG

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   558.560.........570.........580.........590.........600.........610.........620.........630.......
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  GYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEAREILPIGASSPIQVDIRIISATNQNLAQFIA
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Template Sequence  LTE. . . . . . . . . . . . . . AVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILE
Template Known Secondary structure  ..............
SSSSGGGS
TTT

SSS


TT

TT
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   652.. .....660.........670.........680.........690.........700.........710.......
 
   423......430.........440.........450.........460......... 470.........480.
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Query Sequence  . . . . . . . . . . . . . . . . . . . EGKFREDLFYRLNVIPITLPPLRERQEDIELLVHYFLHLHTRRLGSV. . YPGIAPDVVEIL
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Template Sequence  GLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEI. VVFRPLTK. . EQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFL
Template Known Secondary structure  TT

TTTS
T
SB
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   718.720.........730.........740.........750. ........ 760.........770.........780.........790....
 
   482 .......490.........500.
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Query Sequence  R. . KHRWPGNLRELSNLMEYLV
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Template Sequence  AERGYDPVFGARPLRRVIQREL
Template Known Secondary structure 
BTTTBTST
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   795....800.........810......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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