Job Description Q46802 Confidence 98.95% Date Wed Jan 25 15:21:12 GMT 2012 Rank 76 Aligned Residues 210 % Identity 22% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.											290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	.	.	.	.	.	.	.	.	.	.	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																																																															.	.	.
Template Sequence		K	V	T	F	K	D	V	A	G	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	.	.	.	A	R	V	P	F	I	T	A	S	G	S	D	F	V	E	M
Template Known Secondary structure					G	G	G	S	S	S																								T	T													T	T	S	S												.	.	.	T	T														S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.							.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	.	.	.	.	.	.	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I
Query Conservation																																												.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Sequence		F	V	G	V	G	.	.	.	.	.	.	.	.	.	.	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	.	.	.	.	.	.	.	.	.	F	E	K	D	T	A	I	V	V
Template Known Secondary structure		T	T	T			.	.	.	.	.	.	.	.	.	.													T	S		S							T																							T	T	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.											.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280										.	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	S	A	T	N	Q	N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	.	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	H	R	W	P	G
Query Conservation																										.
Alig confidence								.	.	.	.	.	.	.												.														.	.												.	.	.	.	.	.	.	.																		.
Template Conservation								.	.	.	.	.	.	.																										.	.												.	.	.	.	.	.	.	.																		.
Template Sequence		M	A	A	T	N	R	.	.	.	.	.	.	.	P	D	I	L	D	P	A	L	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	.	.	K	G	R	E	Q	I	L	R	I	H	A	.	.	.	.	.	.	.	.	R	G	K	P	L	A	E	D	V	D	L	A	L	L	A	K	R	.	T	P	G
Template Known Secondary structure						S		.	.	.	.	.	.	.	T	T	S	S						S	T	T	S	S												.	.												.	.	.	.	.	.	.	.	T	T	S		B		T	T									T	.		T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.																										.	.												.	.	.	.	.	.	.	.																		.
Template SS confidence
		298	.	300	.	.	.								.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.
			489	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure		.														.	.
Query SS confidence		.														.	.
Query Sequence		.	N	L	R	E	L	S	N	L	M	E	Y	L	V	.	.	N	V	V	P	S	G	E	V	I	D	S	T	L	L
Query Conservation		.														.	.
Alig confidence		.														.	.
Template Conservation
Template Sequence		F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K	D	L
Template Known Secondary structure																					T	T			S	B
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions