Job Description Q46802 Confidence 98.87% Date Wed Jan 25 15:21:12 GMT 2012 Rank 89 Aligned Residues 199 % Identity 22% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		A	N	A	P	D	E	P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	H	K	L	S	G	R	R	N	K	P	.	.	F	I	A	I	N	C	A	A	I	P	E	Q	L	L	E
Query Conservation																																																																	.	.
Alig confidence																													.	.																																			.	.
Template Conservation																													.	.
Template Sequence		V	E	K	Y	R	P	Q	R	L	D	D	I	V	G	Q	E	H	I	V	K	R	L	K	H	Y	V	K	.	.	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I
Template Known Secondary structure		G	G	T	S				S	G	G	G			S													T	.	.	T	T									S		T	T	S	S	T	T												G	G	G										T	T	T	S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D	I	R	I	I	S	A	T	N	Q	N	L	A
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	.	.	.	.	.	.	.	.	.	.	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	.	.	.	.	.	.	.	.	.	.	.	S	N	V	R	F	I	L	S	C	N	Y	.	.	.
Template Known Secondary structure									T	T	S			S	S	S		.	.	.	.	.	.	.	.	.	.	S								T	G	G	G	S															T	T	.	.	.	.	.	.	.	.	.	.	.	T	T								S		.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.											110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.												.	140	.	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E
Query Conservation
Alig confidence		.	.	.	.																						.	.	.	.																	.	.	.	.	.	.	.																.
Template Conservation		.	.	.	.																						.	.	.	.																	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	.	.	.	.	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	.	.	.	.	.	.	.	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	.	E	G	D	M	R	R	A	I	N	I	L	Q
Template Known Secondary structure		.	.	.	.	G	G	G	S						T	T											.	.	.	.																T	.	.	.	.	.	.	.																.	T	T
Template Predicted Secondary structure		.	.	.	.																						.	.	.	.																	.	.	.	.	.	.	.																.
Template SS confidence
						150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.
		499	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		214	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions