Return to main results Retrieve Phyre Job Id

Job DescriptionQ46802
Confidence88.85%DateWed Jan 25 15:21:12 GMT 2012
Rank459Aligned Residues35
% Identity26%Templatec1hlvA_
PDB info PDB header:dna binding protein/dnaChain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   552.......560.... .....570.........580......
Predicted Secondary structure 
..



Query SS confidence 












. .





















Query Sequence  EKQMIREALSRHN. . SKKQVADELGIGIATLYRKIKK
Query Conservation 
   
  

   
..
   

  




 






 
Alig confidence 












..





















Template Conservation   
  

         
    
  
 
  


      
Template Sequence  EKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKN
Template Known Secondary structure 
TTS
T

T
Template Predicted Secondary structure 









Template SS confidence 




































   12.......20.........30.........40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions