 |
Job Description | Q46802 | Confidence | 88.85% | Date | Wed Jan 25 15:21:12 GMT 2012 |
Rank | 459 | Aligned Residues | 35 |
% Identity | 26% | Template | c1hlvA_ |
PDB info |
PDB header:dna binding protein/dna | Chain: A: PDB Molecule:major centromere autoantigen b; |
PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna
|
Resolution | 2.50 Å |
|
  |   |
552 | . | . | . | . | . | . | . | 560 | . | . | . | . | |
|
. | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | Q | M | I | R | E | A | L | S | R | H | N | . |
. |
S | K | K | Q | V | A | D | E | L | G | I | G | I | A | T | L | Y | R | K | I | K | K |
Query Conservation |   |
|   |   |   |
|   |   |
|
|   |   |   |
| . | . |
|   |   |   |
|
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
E | K | S | R | I | I | Q | E | V | E | E | N | P | D | L | R | K | G | E | I | A | R | R | F | N | I | P | P | S | T | L | S | T | I | L | K | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|