Job Description Q46802 Confidence 99.05% Date Wed Jan 25 15:21:12 GMT 2012 Rank 67 Aligned Residues 244 % Identity 11% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																	.	.	.	.																								.
Query SS confidence																																	.	.	.	.																								.
Query Sequence		V	A	N	A	P	D	E	P	H	I	E	Q	L	V	G	E	C	R	V	M	R	Q	L	K	R	L	I	S	R	I	A	.	.	.	.	P	S	P	S	S	V	M	V	V	G	E	S	G	T	G	K	E	V	V	A	R	A	I	.	H	K	L	S	G	R	R	N	K	P	F	I	A	I	N	C	A	A	I	P	E
Query Conservation																																	.	.	.	.																								.
Alig confidence																																	.	.	.	.																								.
Template Conservation
Template Sequence		D	S	V	F	S	P	S	Y	V	P	K	R	L	P	H	R	E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y	R	N
Template Known Secondary structure		G	G	G	G	S	T	T				S			T	T																		S		B	S	S										T	T	S	S													T	T	S										T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.									.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		Q	L	L	E	S	E	L	F	G	Y	V	K	G	A	F	T	G	A	S	A	N	G	K	T	G	L	I	Q	A	.	.	.	.	.	.	.	.	A	N	T	G	T	L	F	L	D	E	I	G	D	M	P	L	M	L	Q	A	K	L	L	R	A	I	E	A	R	E	I	L	P	I	G	A	S	S	P	I	Q	V	D
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.																																.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F	P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	.	.	.	.	.	.	L	G	A	F	R	I
Template Known Secondary structure														T					S	S																		T	T									T	G	G	G	S												T	T					.	.	.	.	.	.		S	S	B
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	R	I	I	S	A	T	N	Q	N	L	A	Q	F	I	A	E	G	K	F	R	E	D	L	F	Y	R	L	N	V	I	P	I	T	L	P	P	L	R	E	R	Q	E	D	I	E	L	L	V	H	Y	F	L	H	L	H	T	R	R	L	G	S	V	Y	P	G	I	A	P	D	V	V	E	I	L	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence															.	.	.	.	.																						.	.																	.	.	.	.	.														.	.	.	.	.
Template Conservation															.	.	.	.	.																						.	.																	.	.	.	.	.
Template Sequence		A	L	V	I	V	G	H	N	D	A	V	L	N	.	.	.	.	.	N	L	D	P	S	T	R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	.	.	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	.	.	.	.	.	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G
Template Known Secondary structure								S	S	T					.	.	.	.	.	T	S									T	T									B	.	.																B	.	.	.	.	.		T	T	S	S													S
Template Predicted Secondary structure															.	.	.	.	.																						.	.																	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
					482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.			.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure		.	.	.																					.	.
Query SS confidence		.	.	.																					.	.
Query Sequence		.	.	.	R	K	H	R	W	P	G	N	L	R	E	L	S	N	L	M	E	Y	L	V	.	.	N	V	V	P	S	G	E	V	I	D	S	T	L	L	P	P	N	L	L	N
Query Conservation		.	.	.																					.	.
Alig confidence		.	.	.																					.	.
Template Conservation
Template Sequence		A	Q	T	P	L	D	T	N	R	G	D	A	R	L	A	I	D	I	L	Y	R	S	A	Y	A	A	Q	Q	N	G	R	K	H	I	A	P	E	D	V	R	K	S	S	K	E
Template Known Secondary structure		B	S	S	T	T		T	T																					T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions