Job Description P0A9F3 Confidence 73.56% Date Thu Jan 5 11:10:03 GMT 2012 Rank 245 Aligned Residues 80 % Identity 10% Template d1xmaa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain PadR-like Resolution 2.30

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		Q	L	R	Y	I	V	E	V	V	N	H	N	L	N	V	S	S	T	A	E	G	L	.	.	.	.	.	.	.	.	Y	T	S	Q	P	G	I	S	K	Q	V	R	M	L	E	D	E	L	G	I	Q	I	F	S	R	S	G	.	.	.	K	H	L	T	Q	V	T	P	A	G	Q	E	I	I	R	I	A	R	E	V
Query Conservation																								.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		D	T	I	I	L	S	L	L	I	E	G	D	S	Y	G	Y	E	I	S	K	N	I	R	I	K	T	D	E	L	Y	V	I	K	E	T	T	L	Y	S	A	F	A	R	L	E	K	N	G	Y	I	K	S	Y	Y	G	E	E	T	K	R	R	T	Y	Y	R	I	T	P	E	G	I	K	Y	Y	K	Q	K	C	E	E
Template Known Secondary structure																												T	T	S																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		74	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	V	D	A	I	K	S	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	L	T	K	K	V	I	N	K	F
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions