Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9F3
Confidence81.50%DateThu Jan 5 11:10:03 GMT 2012
Rank220Aligned Residues207
% Identity9%Templatec3muqB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100...... ...110.........120.........130.........140.........150....... ..160......
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Query Sequence  SLYIATTHTQARY. ALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYED. . . . . . LVMLPCYHW
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Template Sequence  HVRLATTTSTYHSGLLDYLLPQFEKDTG. YKVDVIAAGTGKALKXGENGDVDLVXTHAPKAEGTFVEKGYGVLPRKLXYN
Template Known Secondary structure  TGGGGT
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   28.30.........40.........50..... ....60.........70.........80.........90.........100......
 
   167..170.........180....... ..190.........200.........210......... 220.........230.......
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Query Sequence  NRAIVVTPDHPLAGKKAITIE. . . . . . ELAQYPLVTYTFGFTGRSELDTAFNRAGLTPR. . . IVFTATDADVIKTYVRLG
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Template Sequence  DFVIVGPKADPAKIKDDESVLDVFKEIANKNATFISRGDDSGTHKKEXGFWAQTKIEPNFGGYRSVGQGXGPTLNXASEX
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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   238.240........ .250.........260.........270.........280. ........290.........300.
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Query Sequence  LGVGVIASMAV. DPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLR. . . . SYMYDFIQRFAPHLTRDVVD
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Template Sequence  QGYTXSDRGTWLAYQNKLDLEILFQGDEKLFNPYQVILVNPERYPTINYQGAKAFSDWLVNPRGQELIN
Template Known Secondary structure  T
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   187..190.........200.........210.........220.........230.........240.........250.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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