Job Description P0A9F3 Confidence 99.71% Date Thu Jan 5 11:10:03 GMT 2012 Rank 32 Aligned Residues 199 % Identity 14% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	S	L	Y	I	A	T	T	H	T	Q	A	R	Y	A	L	P	N	V	I	K	G	F	I	E	R	Y	P	R	V	S	L	H	M	H	Q	G	S	P	T	Q	I	A	D	A	V	S	K	G	N	A	D	F	A	I	A	T	E	A	L	H	L	Y	E	D	L	V	M	L	P	C	Y	H	W	N	R	A	I
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		P	Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	.	.	.	.	.	.	I	A	L	R	A	G	D	D	S	G	L	R	A	R	H	L	F	D	S	R	F	R	V
Template Known Secondary structure																		T													T	T									S	T	T					T	T	S	S	S	.	.	.	.	.	.									S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.							.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		V	V	T	P	D	H	P	L	A	G	K	K	A	I	T	I	E	E	L	A	Q	Y	P	L	V	T	Y	T	F	G	F	T	G	R	S	E	L	D	T	A	F	N	R	A	G	L	T	P	R	I	V	F	T	A	T	D	A	D	V	I	K	T	Y	V	R	L	G	L	G	V	G	V	I	A	S	M	A	V	.	D
Query Conservation																																																																																.
Alig confidence																																																																																.
Template Conservation
Template Sequence		I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G	I	V	C	L	S	D	F	L	V	D	N
Template Known Secondary structure															S	S	G	G	G	G	G	G	S		B				S	S		G	G	G	G							T	T	S								S	S			S	S										T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		P	V	A	D	P	D	L	V	R	V	.	D	A	H	D	I	F	S	H	S	T	T	K	I	G	F	R	R	S	T	F	L	R	S	Y	M	Y	D	F	I	Q	R	F	A	P	H	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L
Template Known Secondary structure						T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions