Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9F3
Confidence49.94%DateThu Jan 5 11:10:03 GMT 2012
Rank344Aligned Residues84
% Identity10%Templatec3fj7A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   218.220.........230.........240.........250.........260.........270.........280.........290.......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  PRIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRRSTFLRSYMYDFIQRFAPHLTR
Query Conservation                  
  
 

 


           
  
            
        
     

      
  
Alig confidence 





























































.
















Template Conservation                     
                     
             
      .   
  

 

 
 
 
Template Sequence  NNIVAFVPNSGSARKLFAQDQADAWITWIDWSKSNPDIGTAVAIEKDLVVYRTFNVIAKEGA. SKETQDFIAYLSSKEAK
Template Known Secondary structure  TSSTT

S
TTS


TTT


TT
.
TTS
Template Predicted Secondary structure 






























.

Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220... ......230.........240
 
   298.300..
Predicted Secondary structure 
Query SS confidence 




Query Sequence  DVVDA
Query Conservation       
Alig confidence 




Template Conservation   
   
Template Sequence  EIFKK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   241....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions