Job Description P0A9F3 Confidence 96.30% Date Thu Jan 5 11:10:03 GMT 2012 Rank 101 Aligned Residues 93 % Identity 11% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																	.	.	.																																									.	.	.	.
Query SS confidence																	.	.	.																																									.	.	.	.
Query Sequence		M	K	L	Q	Q	L	R	Y	I	V	E	V	V	N	H	.	.	.	N	L	N	V	S	S	T	A	E	G	L	Y	T	S	Q	P	G	I	S	K	Q	V	R	M	L	E	D	E	L	G	I	Q	I	F	S	R	S	G	K	H	.	.	.	.	L	T	Q	V	T	P	A	G	Q	E	I	I	R	I	A	R	E	V
Query Conservation																	.	.	.																																									.	.	.	.
Alig confidence																	.	.	.																													.												.	.	.	.
Template Conservation																																																.
Template Sequence		M	T	I	K	E	F	I	L	L	T	Y	L	F	H	Q	Q	E	N	T	L	P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	.	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L
Template Known Secondary structure		S													S		S		S											S	S	S		G	G	G	T										T	.	T	S							S	S	S	T	T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	K	V	D	A	I	K	S	V	A	G	E	H	T	W	P	D	K	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	Q	I	I	K	Q	F	N	L	A	D	Q	S	E	S	Q	M	I	P	K
Template Known Secondary structure													T	T			S	S		S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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