Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8J8
Confidence99.76%DateThu Jan 5 11:08:00 GMT 2012
Rank109Aligned Residues187
% Identity16%Templatec3llmB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase a; PDBTitle: crystal structure analysis of a rna helicase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
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Query Sequence  HPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTREL
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Template Sequence  DHDLQAILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRA. . . . . AECNIVVTQPRRIS
Template Known Secondary structure 
TSGGGGG
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TTSSTT
G.....GG
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   375....380.........390.........400.........410.........420.........430..... ....440.........
 
   97..100.........110.........120.........130.........140.........150.........160.........170......
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Query Sequence  AVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFI
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Template Sequence  AVSVAERVAFERGEEPGKSCGYSVRFESI. . . . LPRPHASIXFCTVGVLLRKLEA. . . GIRGISHVIVDEIH. ERDINTD
Template Known Secondary structure  TTT

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   450.........460.........470........ .480.........490.........500 .........510.... .....520.
 
   177..180.........190.........200.........210........
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Query Sequence  KDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
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Template Sequence  FLLVVLRDVVQAYPEVRIVLXSATI. . DTSXFCEYFFNCPII
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TTS

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   522.......530.........540...... ...550.........560.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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