Job Description P0A8J8 Confidence 99.72% Date Thu Jan 5 11:08:00 GMT 2012 Rank 113 Aligned Residues 162 % Identity 14% Template c3b6eA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1; PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain Resolution 1.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	T	P	I	Q	A	L	A	L	P	L	T	L	A	G	R	D	V	A	G	Q	A	Q	T	G	T	G	K	T	M	A	F	L	T	S	T	F	H	Y	L	L	S	H	P	A	I	A	D	R	K	V	N	Q	P	R	A	L	I	M	A	P	T	R	E	L	A	V	Q	I	H	A	D	A	E	P	L	A	E	A
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		Q	L	R	P	Y	Q	M	E	V	A	Q	P	A	L	E	G	K	N	I	I	I	C	L	P	T	G	S	G	K	T	R	V	A	V	Y	I	A	K	D	H	L	D	K	K	K	K	A	S	.	.	.	.	E	P	G	K	V	I	V	L	V	N	K	V	L	L	V	E	Q	L	F	R	K	E	F	Q	P	F	L	K
Template Known Secondary structure																T	T								S																							T	T	.	.	.	.										S	S											T						T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	K	L	G	L	A	Y	G	G	D	G	Y	D	K	Q	L	K	V	L	E	S	G	V	D	I	L	I	G	T	T	G	R	L	I	D	Y	A	K	Q	N	H	I	N	L	G	A	I	Q	V	V	V	L	D	E	A	D	R	M	Y	D	L	G	F	I	K	D	I	R	W	L	F	R	R	M	P	P	A	N
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		K	W	Y	R	V	I	G	L	S	G	L	K	I	S	F	P	E	V	V	K	S	C	D	.	.	.	.	I	I	I	S	T	A	Q	I	L	E	N	S	L	L	N	G	V	Q	L	S	D	F	S	L	I	I	I	D	E	C	V	Y	N	N	I	M	R	H	Y	L	M	Q	K	L	K	N	N	R	L	K	K	E	N
Template Known Secondary structure		T	T	S																				S	.	.	.	.																			G	G	G		S					T	T																							T	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.					.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		191						.	.	.	.	.	.	.	.	200
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		Q	.	.	.	.	.	R	L	N	M	L	F	S	A	T
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.
Template Conservation
Template Sequence		K	P	V	I	P	L	P	Q	I	L	G	L	T	A	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions