Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8J8
Confidence98.16%DateThu Jan 5 11:08:00 GMT 2012
Rank136Aligned Residues72
% Identity25%Templatec2xzlA_
PDB info PDB header:hydrolase/rnaChain: A: PDB Molecule:atp-dependent helicase nam7; PDBTitle: upf1-rna complex
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
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Query Sequence  GFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL
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Template Sequence  NFAQLNSSQSNAVSHVLQRPLSLIQGPPGTGKTVT. SATIVYHLSKIHKD. . . . . . . . RILVCAPSNVAVDHLAAKLRDL
Template Known Secondary structure  TS



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   405....410.........420.........430......... 440.........450... ......460.........470.....
 
   108
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Query Sequence  A
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Template Sequence  G
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   476
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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