Job Description P0A8J8 Confidence 99.86% Date Thu Jan 5 11:08:00 GMT 2012 Rank 90 Aligned Residues 181 % Identity 30% Template c2kbfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of carboxyl-terminal domain of dbp5p Resolution UNK

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		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	E	Q	K	T	G	H	R	I	K	E	E	L	F	Y	P	S	N	E	E	K	M	R	L	L	Q	T	L	I	E	E	E	W	P	D	R	A	I	I	F	A	N	T	K	H	R	C	E	E	I	W	G	H	L	A	A	D	G	H	R	V	G	L	L	T	G	D	V	A	Q	K	K	R	L	R	I	L	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	E	V	N	V	D	A	I	K	Q	L	Y	M	D	C	K	N	E	A	D	K	F	D	V	L	T	E	L	Y	G	L	M	T	I	G	S	S	I	I	F	V	A	T	K	K	T	A	N	V	L	Y	G	K	L	K	S	E	G	H	E	V	S	I	L	H	G	D	L	Q	T	Q	E	R	D	R	L	I	D	D
Template Known Secondary structure				S	S		S	S	S	S								S	S													T	T	S			S							S															T	T	S						S	S		S
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.							.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		F	T	R	G	D	L	D	I	L	V	A	T	D	V	A	A	R	G	L	H	I	P	A	V	T	H	V	F	N	Y	D	L	P	.	.	.	.	.	.	D	D	C	E	D	Y	V	H	R	I	G	R	T	G	R	A	G	A	S	G	H	S	I	S	L	A	C	E	E	Y	A	L	N	L	P	A	I	E	T	Y	I
Query Conservation																																			.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	E	G	R	S	K	V	L	I	T	T	N	V	L	A	R	G	I	D	I	P	T	V	S	M	V	V	N	Y	D	L	P	T	L	A	N	G	Q	A	D	P	A	T	Y	I	H	R	I	G	R	T	G	R	F	G	R	K	G	V	A	I	S	F	V	H	D	K	N	S	F	N	I	L	S	A	I	Q	K	Y
Template Known Secondary structure				T	T	T							S	S				G	G	G		S				S					S	S					S	S	S	S												T		S	S		S	S										S
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	S	I	P	V	S	K	Y	N	P	D	A	L	M	T	D	L	P	K	P	L	R	L	T	R	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	D	I	E	M	T	R	V	P	T	D	D	W	D	E	V	E	K	I	V	K	K	V	L	K	D
Template Known Secondary structure			T										S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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