Job Description P0A8J8 Confidence 99.94% Date Thu Jan 5 11:08:00 GMT 2012 Rank 72 Aligned Residues 154 % Identity 40% Template c2hjvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein Resolution 1.95 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	K	E	E	L	F	Y	P	S	N	E	E	K	M	R	L	L	Q	T	L	I	E	E	E	W	P	D	R	A	I	I	F	A	N	T	K	H	R	C	E	E	I	W	G	H	L	A	A	D	G	H	R	V	G	L	L	T	G	D	V	A	Q	K	K	R	L	R	I	L	D	E	F	T	R	G	D	L	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	E	H	A	V	I	Q	V	R	E	E	N	K	F	S	L	L	K	D	V	L	M	T	E	N	P	D	S	C	I	I	F	C	R	T	K	E	H	V	N	Q	L	T	D	E	L	D	D	L	G	Y	P	C	D	K	I	H	G	G	M	I	Q	E	D	R	F	D	V	M	N	E	F	K	R	G	E	Y	R	Y
Template Known Secondary structure												G	G	G															S	S						S	S														T	T								T	T	S															T	S		S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	T	D	V	A	A	R	G	L	H	I	P	A	V	T	H	V	F	N	Y	D	L	P	D	D	C	E	D	Y	V	H	R	I	G	R	T	G	R	A	G	A	S	G	H	S	I	S	L	A	C	E	E	Y	A	L	N	L	P	A	I	E	T	Y	I	G	H	S	I	P	V	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	T	D	V	A	A	R	G	I	D	I	E	N	I	S	L	V	I	N	Y	D	L	P	L	E	K	E	S	Y	V	H	R	T	G	R	T	G	R	A	G	N	K	G	K	A	I	S	F	V	T	A	F	E	K	R	F	L	A	D	I	E	E	Y	I	G	F	E	I	Q	K	I	E
Template Known Secondary structure						T	T	T	T	T	T	S					B	S					S	S			S	S									T	T	B		B	T	T	B										T	T													T	S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions