Job Description P0A8J8 Confidence 87.48% Date Thu Jan 5 11:08:00 GMT 2012 Rank 289 Aligned Residues 58 % Identity 21% Template c1s3sA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:transitional endoplasmic reticulum atpase (ter PDBTitle: crystal structure of aaa atpase p97/vcp nd1 in complex with2 p47 c Resolution 2.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		K	T	H	L	T	E	Q	K	F	S	D	F	A	L	H	P	K	V	V	E	A	L	E	.	.	.	K	K	G	F	H	N	C	T	P	I	Q	A	L	A	L	P	L	T	L	A	G	R	D	V	A	G	Q	A	Q	T	G	T	G	K	T	M	A	F
Query Conservation																									.	.	.
Alig confidence																									.	.	.																	.	.	.
Template Conservation																																												.	.	.
Template Sequence		E	E	S	L	N	E	V	G	Y	D	D	V	G	G	C	R	K	Q	L	A	Q	I	K	E	M	V	E	L	P	L	R	H	P	A	L	F	K	A	I	G	V	K	.	.	.	P	P	R	G	I	L	L	Y	G	P	P	G	T	G	K	T	L	I	A
Template Known Secondary structure					T	T	S			G	G	G			S																			T	T									.	.	.										S	T	T	S	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions