Job Description P0A8J8 Confidence 100.00% Date Thu Jan 5 11:08:00 GMT 2012 Rank 14 Aligned Residues 364 % Identity 22% Template c1gl9B_ PDB info PDB header:topoisomerase Chain: B: PDB Molecule:reverse gyrase; PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp Resolution 3.2 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	L	E	K	K	G	F	H	N	C	T	P	I	Q	A	L	A	L	P	L	T	L	A	G	R	D	V	A	G	Q	A	Q	T	G	T	G	K	T	M	A	F	L	T	S	T	F	H	Y	L	L	S	H	P	A	I	A	D	R	K	V	N	Q	P	R	A	L	I	M	A	P	T	R	E	L	A	V	Q	I
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	E	F	F	R	K	C	V	G	E	P	R	A	I	Q	K	M	W	A	K	R	I	L	R	K	E	S	F	A	A	T	A	P	T	G	V	G	K	T	S	F	G	L	A	M	S	L	F	L	A	.	.	.	.	.	.	.	.	.	.	L	K	G	K	R	C	Y	V	I	F	P	T	S	L	L	V	I	Q	A
Template Known Secondary structure										T		S														T	T									B	T	S															.	.	.	.	.	.	.	.	.	.	T	T	T								S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.					.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																.	.	.	.																				.	.
Query SS confidence																.	.	.	.																				.	.
Query Sequence		H	A	D	A	E	P	L	A	E	A	T	G	L	K	.	.	.	.	L	G	L	A	Y	G	G	D	G	Y	D	K	Q	L	K	V	L	E	S	.	.	G	V	D	I	L	I	G	T	T	G	R	L	I	D	Y	A	K	Q	N	H	I	N	L	G	A	I	Q	V	V	V	L	D	E	A	D	R	M	Y	D	L	G
Query Conservation																.	.	.	.																				.	.
Alig confidence																.	.	.	.																				.	.																		.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		A	E	T	I	R	K	Y	A	E	K	A	G	V	G	T	E	N	L	I	G	Y	Y	H	G	R	I	P	K	R	E	K	E	N	F	M	Q	N	L	R	N	F	K	I	V	I	T	T	T	Q	F	L	S	K	H	Y	R	.	.	.	.	E	L	G	H	F	D	F	I	F	V	D	D	V	D	A	I	L	K	A	S
Template Known Secondary structure										T	T	T					T	T	T						S												T	T	T	T	S		S													S	S	.	.	.	.	S	S				S					S		S					T	S
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		175	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence		F	I	K	D	I	R	W	L	F	.	.	.	.	.	.	.	.	.	R	R	M	P	P	A	N	Q	R	L	N	M	L	F	S	A	T	L	S	Y	R	V	R	E	L	A	F	E	Q	M	N	N	A	E	Y	I	E	V	E	P	E	Q	K	T	G	H	R	I	K	E	E	L	F	Y	P	S	N	E	E	K	M	R
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																																																		.	.	.
Template Sequence		K	N	V	D	K	L	L	H	L	L	G	F	H	Y	D	L	K	T	K	S	W	V	G	E	A	R	G	C	L	M	V	S	T	A	T	A	K	K	G	K	K	A	E	L	F	R	Q	L	.	.	.	L	N	F	D	I	G	S	S	R	I	T	V	R	N	V	E	D	V	A	V	N	D	E	S	I	S	T	L	S
Template Known Secondary structure												T				B	T	T	T	T	B							S							B	S	S				T	T	T							.	.	.		S					B	S													S				T	T	T	T
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		L	L	Q	T	L	I	E	E	E	W	P	D	R	A	I	I	F	A	N	T	K	H	R	C	E	E	I	W	G	H	L	A	A	D	G	H	R	V	G	L	L	T	G	D	V	A	Q	K	K	R	L	R	I	L	D	E	F	T	R	G	D	L	D	I	L	V	A	.	.	.	.	T	D	V	A	A	R	G	L	H
Query Conservation																																																																					.	.	.	.
Alig confidence								.	.	.	.																									.	.	.	.	.	.																												.	.	.	.
Template Conservation								.	.	.	.																									.	.	.	.	.	.
Template Sequence		S	I	L	E	K	L	.	.	.	.	G	T	G	G	I	I	Y	A	R	T	G	E	E	A	E	E	I	Y	E	S	L	K	N	K	.	.	.	.	.	.	F	R	I	G	I	V	T	A	T	K	K	G	D	Y	E	K	F	V	E	G	E	I	D	H	L	I	G	T	A	H	Y	Y	G	T	L	V	R	G	L	D
Template Known Secondary structure					T	T	S	.	.	.	.		S							S	S									T	T	S	S	S	S	.	.	.	.	.	.	S				B		S	S	S										T	T	S		S												T	G	G	G	T
Template Predicted Secondary structure								.	.	.	.																									.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		322	.	.		.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	A	.	V	T	H	V	F	N	Y	D	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	R	I	R	F	A	V	F	V	G	C	P	S	F	R	V	T	I	E	D	I	D	S	L	S	P	Q	M	V	K	L	L	A	Y	L	Y	R	N	V	D	E	I	E	R	L	L	P	A	V	E	R	H	I	D	E	V	R	E	I	L	K	K	V	M	G	K	E	R	P	Q	A	K	D	V	V	V	R	E
Template Known Secondary structure			T	T	T								S								T	T	T		S	S	S		G	G	G						S	S			T	T	T	T					S	S		S	T	T		S										S	S	S	S						S	S	S	B		S	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
								336	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure		.	.	.	.	.	.															.	.																														.	.	.	.
Query SS confidence		.	.	.	.	.	.															.	.																														.	.	.	.
Query Sequence		.	.	.	.	.	.	D	C	E	D	Y	V	H	R	I	G	R	T	G	R	.	.	A	G	A	S	G	H	S	I	S	L	A	C	E	E	Y	A	L	N	L	P	A	I	E	T	Y	I	G	H	S	.	.	.	.	I	P	V	S	K	Y	N	P	D	A	L	M	T	D	L	P	K	P	L	R	L	T	R	P	R
Query Conservation		.	.	.	.	.	.															.	.																														.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.																														.	.	.	.
Template Conservation
Template Sequence		G	E	V	I	F	P	D	L	R	T	Y	I	Q	G	S	G	R	T	S	R	L	F	A	G	G	L	T	K	G	A	S	F	L	L	E	D	D	S	E	L	L	S	A	F	I	E	R	A	K	L	Y	D	I	E	F	K	S	I	D	E	V	D	F	E	K	L	S	R	E	L	D	E	S	R	D	R	Y	R	R	R
Template Known Secondary structure		S																T	T					T	T												S														T	T	S	S						S		S		T																G	G
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	N	G	P	R	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	F	D	L	I	K	P
Template Known Secondary structure		G	G
Template Predicted Secondary structure
Template SS confidence
		499	500	.	.	.	.	.	.