Job Description P0AFJ5 Confidence 99.86% Date Thu Jan 5 11:26:30 GMT 2012 Rank 56 Aligned Residues 105 % Identity 100% Template d1gxqa_ SCOP info DNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators PhoB-like Resolution 2.0

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	A	V	E	E	V	I	E	M	Q	G	L	S	L	D	P	T	S	H	R	V	M	A	G	E	E	P	L	E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	A	V	E	E	V	I	E	M	Q	G	L	S	L	D	P	T	S	H	R	V	M	A	G	E	E	P	L	E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K
Template Known Secondary structure					T	T						T	T					T	T	T	T					T	T																			S		S	S												T		S	S	S				T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	E	P	G	G	H	D	R	M	V	Q	T	V	R	G	T	G	Y	R	F	S	T	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	E	P	G	G	H	D	R	M	V	Q	T	V	R	G	T	G	Y	R	F	S	T	R	F
Template Known Secondary structure				G	G	G	T	G	G	G	G					T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions