Job Description P0AFJ5 Confidence 97.66% Date Thu Jan 5 11:26:30 GMT 2012 Rank 136 Aligned Residues 53 % Identity 17% Template c3qp5C_ PDB info PDB header:transcription Chain: C: PDB Molecule:cvir transcriptional regulator; PDBTitle: crystal structure of cvir bound to antagonist chlorolactone (cl) Resolution 3.25 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K	A	L	E	P	G	G	H	D	R	M	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.
Template Sequence		L	L	S	Q	R	E	Y	D	I	F	H	W	M	S	R	G	K	.	.	.	.	.	.	.	.	.	T	N	W	E	I	A	T	I	L	D	I	S	E	R	T	V	K	F	H	V	A	N	V	I	R	K	L	N	A	N	N	R	T	H	A	I
Template Known Secondary structure															T	T	T		.	.	.	.	.	.	.	.	.										T																		T		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions