Job Description P0AFJ5 Confidence 56.84% Date Thu Jan 5 11:26:30 GMT 2012 Rank 282 Aligned Residues 98 % Identity 17% Template c3pfmA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of a eal domain of ggdef domain protein from2 pseudomonas fluorescens pf Resolution 2.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																							.	.																										.	.	.	.	.
Query SS confidence																							.	.																										.	.	.	.	.
Query Sequence		D	E	A	P	I	R	E	M	V	C	F	V	L	E	Q	N	G	F	Q	P	V	.	.	E	A	E	D	Y	D	S	A	V	N	Q	L	N	E	P	W	P	D	L	I	L	L	D	W	M	.	.	.	.	.	L	P	G	G	S	G	I	Q	F	I	K	H	L	K	R	E	S	M	T	R	D	I	P	V	V	M	L
Query Conservation																							.	.																										.	.	.	.	.
Alig confidence																							.	.																										.	.	.	.	.																											.
Template Conservation																																																																																	.
Template Sequence		P	E	Q	A	X	L	E	Q	L	T	R	R	L	R	E	L	G	F	S	L	S	L	Q	R	F	G	G	R	F	S	X	I	G	N	L	A	R	L	G	L	A	Y	L	K	I	D	G	S	Y	I	R	D	I	D	Q	E	S	D	K	R	L	F	I	E	A	I	Q	R	A	A	H	S	I	D	L	P	L	I	A	.
Template Known Secondary structure																		T									T	T	T	G	G	G	G	G	G					T		S						G	G	G	G	T	T	T	T	T		T																T	T						.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		T	A	R	G	E	E	E	D	R	V	R	G	L	E	T	G	A	D	.	.	.	.	D	Y	I	T	K	P	F	S
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		E	R	V	E	T	E	G	E	L	Q	V	I	R	E	X	G	L	Y	G	V	Q	G	Q	L	F	G	E	P	A	P
Template Known Secondary structure						S											T		S				S	G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions