Job Description P0AFJ5 Confidence 99.66% Date Thu Jan 5 11:26:30 GMT 2012 Rank 126 Aligned Residues 92 % Identity 29% Template c3n53B_ PDB info PDB header:transcription Chain: B: PDB Molecule:response regulator receiver modulated diguanylate cyclase; PDBTitle: crystal structure of a response regulator receiver modulated2 diguanylate cyclase from pelobacter carbinolicus Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	I	L	V	V	E	D	E	A	P	I	R	E	M	V	C	F	V	L	E	Q	N	G	F	Q	P	V	E	A	E	D	Y	D	S	A	V	N	Q	L	N	E	P	W	P	D	L	I	L	L	D	W	M	L	P	G	G	S	G	I	Q	F	I	K	H	L	K	R	E	S	M	T	R	D	I	P	V	V	M	L
Query Conservation
Alig confidence																							.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	I	L	I	I	D	Q	Q	D	F	S	R	I	E	L	K	N	F	L	D	.	S	E	Y	L	V	I	E	S	K	N	E	K	E	A	L	E	Q	I	D	H	H	H	P	D	L	V	I	L	D	X	D	N	L	C	L	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	L	I	L	L
Template Known Secondary structure									S													T	.	T	T	S						S	S														S														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																60	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	R	G	E	E	E	D	R	V	R	G	L	E	T	G	A	D	D	Y	I	T	K	P	F	S	P	K	E	L	V	A	R	I	K	A	V	M	R	R	I	S
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	D	Y	L	T	K	P	F	N	R	N	D	L	L	S	R	I	E	I	H	L	R	T	Q	N
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81															.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions