Job Description P0AFJ5 Confidence 99.75% Date Thu Jan 5 11:26:30 GMT 2012 Rank 119 Aligned Residues 119 % Identity 24% Template c3lufB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein Resolution 1.76 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		A	R	R	I	L	V	V	E	D	E	A	P	I	R	E	M	V	C	F	V	L	E	Q	N	G	F	Q	P	V	E	A	E	D	Y	D	S	A	V	N	Q	L	N	E	P	W	.	P	D	L	I	L	L	D	W	M	L	P	G	G	S	G	I	Q	F	I	K	H	L	K	R	E	S	M	T	R	D	I	P	V	V
Query Conservation																																															.
Alig confidence																																															.
Template Conservation
Template Sequence		Q	I	E	V	L	V	V	D	D	S	R	T	S	R	H	R	T	X	A	Q	L	R	K	Q	L	L	Q	V	H	E	A	S	H	A	R	E	A	L	A	T	L	E	Q	H	P	A	I	R	L	V	L	V	D	Y	Y	X	P	E	I	D	G	I	S	L	V	R	X	L	R	E	R	Y	S	K	Q	Q	L	A	I	I
Template Known Secondary structure		T								S														T	T	T							S	S												T	T								S			S	S	S															T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	T	A	R	G	E	E	E	D	R	V	R	G	L	E	T	G	A	D	D	Y	I	T	K	P	F	S	P	K	E	L	V	A	R	I	K	A	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	S	V	S	D	K	R	G	L	S	A	R	Y	L	K	Q	G	A	N	D	F	L	N	Q	P	F	E	P	E	E	L	Q	C	R	V	S	H	N	L
Template Known Secondary structure							S	T	T									T	T		S						S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions