Job Description P0AFJ5 Confidence 41.40% Date Thu Jan 5 11:26:30 GMT 2012 Rank 346 Aligned Residues 99 % Identity 13% Template c3lopA_ PDB info PDB header:substrate binding protein Chain: A: PDB Molecule:substrate binding periplasmic protein; PDBTitle: crystal structure of substrate-binding periplasmic protein2 (pbp) from ralstonia solanacearum Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure													.	.	.																				.	.	.	.	.	.	.
Query SS confidence													.	.	.																				.	.	.	.	.	.	.
Query Sequence		A	R	R	I	L	V	V	E	D	E	A	.	.	.	P	I	R	E	M	V	C	F	V	L	E	Q	N	G	F	Q	P	V	E	.	.	.	.	.	.	.	A	E	D	Y	D	S	A	V	N	Q	L	N	E	P	W	P	D	L	I	L	L	D	W	M	L	P	G	G	S	G	I	Q	F	I	K	H	L	K	R	E
Query Conservation													.	.	.																				.	.	.	.	.	.	.
Alig confidence													.	.	.																				.	.	.	.	.	.	.																									.	.
Template Conservation																																																																		.	.
Template Sequence		T	R	I	G	V	L	Y	Q	E	D	A	L	G	K	E	A	I	T	G	V	E	R	T	L	K	A	H	A	L	A	I	T	A	X	A	S	Y	P	R	N	T	A	N	V	G	P	A	V	D	K	L	L	A	A	D	V	Q	A	I	F	L	G	A	T	.	.	A	E	P	A	A	Q	F	V	R	Q	Y	R	A	R
Template Known Secondary structure										T	T																T	T	T				S							T	T	S													S			S						S		.	.														T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	T	R	D	I	P	V	V	M	L	T	A	R	G	E	E	E	D	R	V	R	G	L	E	T	G	A	D	D	Y	I	T
Query Conservation
Alig confidence			.	.
Template Conservation			.	.
Template Sequence		G	.	.	G	E	A	Q	L	L	G	L	S	S	I	D	P	G	I	L	Q	K	V	A	G	L	D	A	V	R	G	Y	S	L
Template Known Secondary structure		T	.	.									T	T	S															T	T
Template Predicted Secondary structure			.	.
Template SS confidence
		250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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