Job Description P0AFJ5 Confidence 92.69% Date Thu Jan 5 11:26:30 GMT 2012 Rank 170 Aligned Residues 53 % Identity 17% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K	A	L	E	P	G	G	H	D	R	M	V	Q	T	V	R	G	T	.	.	G	Y	R	F	S
Query Conservation																																																														.	.
Alig confidence																								.	.	.	.	.																			.	.	.	.	.	.	.									.	.
Template Conservation																								.	.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	G	.	.	.	.	.	.	.	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L	D
Template Known Secondary structure								T	T	T	T	S		B										.	.	.	.	.	T	S		G	G	G	T										T	T	.	.	.	.	.	.	.	S	S					S	T	T
Template Predicted Secondary structure																								.	.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions