Job Description P0AFJ5 Confidence 78.25% Date Thu Jan 5 11:26:30 GMT 2012 Rank 210 Aligned Residues 45 % Identity 13% Template c3hugA_ PDB info PDB header:transcription/membrane protein Chain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl Resolution 2.35 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	G	P	T	E	F	K	L	L	H	F	F	M	T	H	P	E	R	V	Y	S	R	E	Q	L	L	N	H	V	W	G	T	N	V	Y	V	E	D	R	T	V	D	V	H	I	R	R	L	R	K	A	L
Query Conservation
Alig confidence																			.	.	.											.	.	.	.	.
Template Conservation																			.	.	.											.	.	.	.	.
Template Sequence		Q	L	S	A	E	H	R	A	V	I	Q	R	S	Y	Y	R	G	.	.	.	W	S	T	A	Q	I	A	T	D	L	.	.	.	.	.	G	I	A	E	G	T	V	K	S	R	L	H	Y	A	V	R	A	L
Template Known Secondary structure		T	S													T	S		.	.	.											.	.	.	.	.	T	S
Template Predicted Secondary structure																			.	.	.											.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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